ProQuest Subject Index - Bioinformatics at UNIVERSITY OF CALIFORNIA SAN DIEGO

TOP >> UNIVERSITY OF CALIFORNIA SAN DIEGO >> Bioinformatics

Browse Institutions

You are viewing titles for UNIVERSITY OF CALIFORNIA SAN DIEGO in the Bioinformatics available through the UMI Dissertations & Thesis Gradwoorks site

MicroRNA analysis of human embryonic stem cell derived cardiomyocytes and neonatal rat ventricular cardiomyocytes	Bioinformatic characterization of the copper and heavy metal families of P-type ATPases

Mutations in NPr/HPr affecting phosphoryl transfer in the phosphotransferase system of E. coli	A phylogenic and structural analysis of the CorA superfamily

P-type ATPases from actinobacteria with fully sequenced genomes	Comparative analysis of piezophilic bacteria: The search for adaptations to life in the deep sea

Modulating cellular fate with arrayed cellular microenvironment technology	Mass spectrometric and bioinformatics approaches to characterizing of cyclic non-ribosomal peptides and ribosomally encoded peptide antibiotic

P-type ATPases in the Proteobacterial, Bacteroidetes and Fusobacterial phyla	Rare variant analysis for common diseases

Defense against cannibalism: The SdpI family of bacterial immunity/signal transduction proteins	A bioinformatic analysis of the Alp8 family

P-type ATPase analysis in cyanobacteria and six miscellaneous bacterial phyla with fully sequenced genomes	Search for an association between single nucleotide polymorphisms of NPY2R and metabolic syndrome traits

Evolution of the Oligopeptide Transporter (OPT) family	Characterization of the putative sulfate exporter family

Changing 14 Residues in the Active Site of NPr can Change its Function to that of HPr and P-type ATPase Analysis in Archaea, Spirochetes and Across All Known Domains of Life	Human Platelet Metabolic Network Reconstruction

Systems analysis of energy metabolism elucidates the roles of mitochondria in human health and disease	Evolution studied through protein structural domains

Temporal encoding and homeostatic control in the IKK-IkappaB-NF-kappaB signaling system	Genome-wide mapping and analysis of mammalian promoters

Efficient and accurate bioinformatics algorithms for peptide mass spectrometry	Neurogenomics in the mouse model: Multivariate statistical methods and analyses

Bioinformatic and experimental analysis of hox and epidermal wound response enhancers in Drosophila	Inferring interactions and functions of proteins using evolutionary information

Analysis and applications of conserved sequence patterns in proteins	Computational tools for high-throughput discovery in biology

Computational methods for genome-wide non-coding RNA discovery and analysis	Modeling and analysis of the E. coli transcriptional regulatory network: An assessment of its properties, plasticity, and role in adaptive evolution

Identification and characterization of transcriptional enhancers in the human genome	Duplications and genome rearrangements

Tales of one gene: Discovery of a novel candidate receptor in mammalian taste	Reconstruction and comparative analysis of diverse metabolic networks

Understanding cellular function through the analysis of protein interaction networks	Accurate prediction of causative protein kinase polymorphisms in inherited disease and cancer

Stress, mixed messages, and hormone signaling: Regulation of translation and the unfolded protein response in pituitary gonadotropes	The distribution and evolution of protein kinase and phosphatase families in the three superkingdoms of life

Algorithms for tandem mass spectrometry-based proteomics	Computational methods for analyzing human genetic variation

Computational structure-based methods to anticipate HIV drug resistance evolution and accelerate inhibitor discovery	Advances in computational mass spectrometry: Phosphoproteomics and proteogenomics

Characterizing protein structures by surface mapping	Lipidomic analysis of eicosanoid dynamics in inflammation and disease

Assembling, analyzing, refining, and cataloging molecular interaction networks	Combinatorial methods in computational genomics: Mammalian phylogenetics using microinversions and fragment assembly with short reads

Computational methods for analyzing and detecting genomic structural variation: Applications to cancer	A stoichiometric model of Escherichia coli's macromolecular synthesis machinery and its integration with metabolism

Understanding the global architecture of gene regulation in human cells through analysis of chromatin signatures	In silico, in vitro, in vivo and in populo: Regulatory genetics of single nucleotide polymorphisms in the phenylethanolamine N-methyltransferase promoter

Methods for the analysis of human genetic variation in the search for the genetic basis of human disease	Information-theoretic and hypothesis-based clustering in bioinformatics

Effective design and analysis of systems genetics studies	The 3-D structure of the immunoglobulin heavy chain locus: Implications for long-range genomic interactions

Statistical methods for the analysis of expression quantitative traits	Optimization algorithms for biological data

Analysis of pluripotent mouse stem cell proteomes: Insights into post-transcriptional regulation of pluripotency and differentiation	Pathway-based modeling and diagnosis of cancer development and progression

The gospel according to LUCA (the last universal common ancestor)	Monte Carlo simulation in systems biology

Booly: A new data integration platform for systems biology	Computational Mass Spectrometry: Algorithms for Identification of Peptides not Present in Protein Databases

Coordination of Axonal Transport Revealed by Particle Tracking and Quantitative Immunofluorescence	Effects of a Highly Repetitive Endogenous Ty1 Retrotransposon on Genome Stability

Evolution of Transcriptional Regulatory Circuits in Yeasts	A Phosphoproteomics Approach Towards Identifying Signaling Pathway Modulators Induced by Small Molecules

On the evolution of the sghC1q gene family, with bioinformatic and transcriptional case studies in zebrafish	Computational Methods and Analyses in Comparative Genomics and Epigenomics

The Comparative Genomics of Salinispora and the Distribution and Abundance of Secondary Metabolite Genes in Marine Plankton	Causation in Biology: A Biomolecular Systems View

Transcriptomic Profiling of the Giant Kelp, Macrocystis pyrifera, Across Environmental Gradients	Methods for Identifying Pathway Epistasis and the Effects of Aging on the Human Methylome