ProQuest Subject Index - Biophysics at UNIVERSITY OF CALIFORNIA BERKELEY

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You are viewing titles for UNIVERSITY OF CALIFORNIA BERKELEY in the Biophysics available through the UMI Dissertations & Thesis Gradwoorks site

Structures and mechanisms of bacterial sigma54-dependent transcription initiation	Allostery in the Ras nucleotide exchange factors

Single-molecule mechanical folding reactions of RNA pseudoknots	Electrospray ionization mass spectrometric investigation of the barnase/barstar interaction

Single-molecule studies of DNA translocation by a molecular motor	Conformational dynamics and activation of the P21 activated kinase

Single molecule studies of a viral DNA packaging motor	Nanotechnologies and chemical tools for cell biology

Statistical imaging with bioanalytical applications	Controlling supported membranes in space and time

Spectroscopic investigation of protein aggregation	Mechanism of DNA transfer by the FtsK/SpoIIIE family of DNA translocases

Quantitative experimental and numerical studies of cell fate decisions along the neural lineage	Collective behavior of Myxococcus xanthus

Controlling dynamics and conformations of DNA in flow through microfabricated post arrays: A single molecule study	Single molecule RNA folding studied with optical trapping

Spatial and curvature patterning of biomembranes	Dynamic interplay between actin networks and membrane in a reconstituted system

Cell characterization using protein-functionalized pores	Chemical approaches towards capturing and imaging a topoisomerase-DNA complex

Molecular mechanisms of Ser/Thr kinase regulation in Mycobacterium tuberculosis	Deconstructing protein/protein signaling using supported lipid bilayers

Mechanisms of surface attachment and detachment in Giardia lamblia	Engineering the living-nonliving interface: New techniques for studying T-cell recognition

Investigations of photosynthetic light harvesting by two-dimensional electronic spectroscopy	An investigation of inorganic scaffolds for studying new techniques and applications in membrane stabilization

Encoding and decoding of natural images by the mid-level visual system	Protein design: From in silico to in vivo

Transport phenomena in microfluidics and microbicide drug delivery systems	Investigation of general metabolism in the metal reducer, Shewanella oneidensis MR-1

Structural studies of tyrosine kinase regulation and substrate specificity	Viral DNA packaging at base pair resolution

Membrane-dependent control of the Ras activator Son of Sevenless	Structural, biochemical, and computational characterization of beta-lactamase/BLIP interactions

Bridging the gap between protein structure and dynamics: Single-molecule studies of protein conformational dynamics	Clustering and transport of costimulatory receptors at the Helper T cell immunological synapse

Mechanism of oxygen activation and coupling to C-H cleavage in taurine alpha-ketoglutarate dioxygenase (TauD) and active-site mutants	Thermodynamic characterization and folding of a moderately thermophilic RNase H: Identification of factors that lead to adaptation at different temperatures

DNA Bending elasticity	Optical control of excitatory neurotransmitter receptors

Fundamentals of imaging electroporation with applications to electrical impedance tomography of irreversible electroporation	Single-molecule studies of gene expression

Protein folding and evolution with lattice models	The effect of torque on RNA polymerase

Biophysical characterization of nucleo-cytoplasmic transport and short length scale DNA bending using integrated optical probes	Structural and biochemical characterization of the P-element transposase of Drosophila melanogaster

Structure and regulatory mechanism of sigma54 activator proteins	Structural studies of calcium/calmodulin dependent protein kinase II activation

Mathematical modeling of bacterial motility	Interrogating the role of spatial organization in receptor function: Eph-ephrin signaling in breast cancer

Probing the heme structure and environment of bacterial Heme-Nitric oxide/OXygen binding domains with resonance Raman spectroscopy	Computational modeling of protein interactions at multiple lengthscales

Programmable manipulation of adherent cell motility using biological breadboards	Beyond the native state: Exploring the role of partially folded conformations on the protein energy landscape

Molecular simulations of the effect of cholesterol on membrane-mediated protein-protein interactions	Molecular Mechanisms of Precise and Robust Gene Regulation in Drosophila

Probing the mechanism of 3D-domain swapping	Fluctuations in Water and their Relation to the Hydrophobic Effect

Investigation of the hydrophobic/steric ratchet mechanism of the anthrax toxin &phis; clamp	Biophysical Mass Spectrometry Techniques for Probing the Higher-Order Structure of Proteins and Complexes

Septin Self-Assembly: Plasticity and Protein Scaffolding	Molecular Mechanisms of Anthrax Toxin Assembly and Transport

A dynamic conformational landscape underlies TFIID's ability to interact with core promoter DNA	The Solvent Mediated Thermodynamics of Cellulose Deconstruction

Nuclear Magnetic Resonance and Biochemical Investigations of Environmental Changes on Structure and Function of Subtilisins	Investigating the Role of Force and Stiffness in Controlling Cell Behavior

Regulatory Dynamics of Natural and Artificial Photosynthesis	From scenes to spikes: Understanding vision from the outside in

Beyond the Model and Into the Map: A Protein Abstract