ProQuest Subject Index - Bioinformatics at UNIVERSITY OF CALIFORNIA BERKELEY

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You are viewing titles for UNIVERSITY OF CALIFORNIA BERKELEY in the Bioinformatics available through the UMI Dissertations & Thesis Gradwoorks site

DNA repair in the chloroplast	Statistical mechanical approaches to informatics: Discovering motifs and clustering data

Microevolutionary responses of the house sparrow to changing environments	Posterior decoding methods for optimization and accuracy control of multiple alignments

Genetic polymorphisms in bovine leukemia virus genome: Transcriptional promoter, regulatory genes, and envelope structural gene	Comparative and evolutionary analysis of cellular pathways

Understanding stress response in Desulfovibrio vulgaris Hildenborough: A proteomics approach	Predicting protein molecular function

On the shapes of tangled curves	Genomic analysis of the receptor-like kinase superfamily in plants

Array-based comparative genomic hybridization in phylogenetics and its application for discovery of rapidly evolving genes: A critical analysis	T-box transcription factors in zebrafish mesoderm development

Functional profiling of the Saccharomyces cerevisiae genome in the study of mechanisms of metal and metalloid toxicity	Distance methods for phylogeny reconstruction

Harnessing natural sequence variation to explore cis-regulatory function and evolution	Resampling methods for protein structure prediction

Annotation, alignment and reconstruction of non-coding RNA	Mapping the affinities of sequence-specific DNA-binding proteins

Protein design: From in silico to in vivo	Statistical analysis of DNA sequence motifs and microarray data

Transcriptome detection by multiple RNA tiling array analysis and identifying functional conserved non-coding elements by statistical testing	CoGe, a new kind of comparative genomics platform: Insights into the evolution of plant genomes

A computational model of human blood clottings: Simulation, analysis, control, and validation	Unbiased population genetic inference from high-throughput sequencing data

Statistical topics in gene regulation	Investigations of natural genomic variation in the fungi

Evolution of silencers and silenced DNA in budding yeasts	Statistical problems in DNA microarray data analysis

Analysis of high-throughput biological data: Some statistical problems in RNA-seq and mouse genotyping	Statistical methods and software for high-throughput gene expression experiments

Systems theory for pharmaceutical drug discovery	Algebraic methods for biochemical reaction network theory

Statistical models for analyzing human genetic variation	Analysis of Two Widespread Versions of a Bacterial Replicative DNA Polymerase

Models To Mechanisms: Leveraging Functional and Evolutionary Information to Describe Regulatory Sequences	The Path of the Blind Watchmaker: A Model of Evolution

RNA Splicing Regulation in Drosophila melanogaster	Algorithms for Next-Generation High-Throughput Sequencing Technologies

Multivariate pattern analysis of anatomic, physiologic, and metabolic imaging data for improved management of patients with gliomas	Ab Initio Discovery of Regulatory Sequences and Characterization of Their Evolutionary Patterns

Accounting for Dependent Evolution Among Sites: Phylogenetic and Population Genetic Approaches	Statistical algorithms in the study of mammalian DNA methylation

Beyond the Model and Into the Map: A Protein Abstract