ProQuest Subject Index - Bioinformatics at THE PENNSYLVANIA STATE UNIVERSITY

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You are viewing titles for THE PENNSYLVANIA STATE UNIVERSITY in the Bioinformatics available through the UMI Dissertations & Thesis Gradwoorks site

Systems engineering based approaches for biological network inference, analysis and redesign	Algorithms for aligning and clustering genomic sequences that contain duplications

Improved pairwise alignment of genomic DNA	Algorithms for classification and prediction of protein structure and function

Molecular evolutionary underpinnings of craniofacial growth and development	Evolutionary dynamics of the U12-type spliceosomal introns in multicellular organisms

The genomic evolution of human influenza A virus	Protein function: Inferences from sequence and structure

Uncovering hidden genomic features using computational approaches	The genetic basis for pigment variation among green sulfur bacteria

Investigation of the genetic and environmental effects on hypertension (high blood pressure) in African Americans	Computational pipeline for the empirical detection of cleaved targets of small silencing RNAs using degradome sequencing data

Phylogenetic conservation of cis-regulatory regions using sequence alignability and cladistic motifs	Mechanisms of insertion and deletion mutations: Rate variation, context specificity, and impact on primate sex chromosome evolution

Analysis of mammalian overlapping reading frames and species composition in metagenomic samples	A genomic analysis of the evolution of prokaryotes: Astrobiological perspectives on the colonization of environments on earth

Computational design and experimental characterization of proteins with novel functions	Assembly algorithms for next-generation sequence data

Origins and evolution of three multidomain gene families concerned with basic cellular and developmental processes in eukaryotes	The origins and evolution of highly conserved gene families concerned with basic cellular and development processes

Identification and functional analysis of occludin phosphorylation	A systems biology approach for the study of biomolecules and bionetworks

Computational tools and their applications in plant comparative genomics	Distinctive genomic features of erythroid cis-regulatory modules

Understanding evolutionary history using molecular phylogenetics: From genes to genomes	The diversity and coping mechanisms of life inhabiting the hypersaline Dead Sea

Identifying structural changes in evolving viral proteins	Widespread occurrence and evolution of human pathogenic Fusarium

Automating analysis of gene cluster evolution	Roles of histone modifications and transcription factors in transcription regulation in erythropoiesis

Bordetella species: Sensing and evading host immunity	Substitution Markov chains with applications to molecular evolution

Epigenetic modulation of erythroid expression: An integrative study of histone modifications, transcription factors and transcriptomes	Ecophysiology and metabolism of green bacteria inferred from -omics studies

DNA sequence analysis: New applications with high throughput sequencing and new methods in studying gene families and human haplogroups	Functional transcriptomics: Ecologically important genetic variation in non-model organisms

Evolutionary changes of microRNA genes and the population dynamics of mutant genes in varying environments