ProQuest Subject Index - Bioinformatics at THE JOHNS HOPKINS UNIVERSITY

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You are viewing titles for THE JOHNS HOPKINS UNIVERSITY in the Bioinformatics available through the UMI Dissertations & Thesis Gradwoorks site

Vector alignment search tool (VAST) automated protein structure comparison using special structural elements	A novel statistical method for microarray data integration: Applications to cancer research

Transcriptome and proteome analyses of heart failure	Some probability and statistics problems in proteomics research

Dissecting pathways with the yeast knockout collection	The use of microarrays and related genomics tools to reverse engineer mammalian cell culture targeting specific cellular features with application in biotechnology

Improving VAST structure alignment performance and analysis of small molecule contacts in protein structures	DynoPoSSuM: Prediction of MHC class I-restricted epitopes coupling a dynamic database with a position-specific scoring matrix and its application

A systematic methodology for genome-wide identification of antiangiogenic peptides	Crossing the divide: Molecular determinants of Toxoplasma invasion and egress

A novel statistical approach for sigma 28 promoter prediction in eubacteria	A likelihood-based method for whole-genome association testing of case-control and trio data

Systematic analysis of motions and communication networks in a benchmark set of allosteric proteins	Gene association networks and higher-order interactions: Algorithms and statistical models

Systematic characterization of cis-regulation in C.elegans using evolutionary conservation	Deconstruction of fungal, nonreducing iterative type I polyketide synthases

The human gut microbiota: New analyses and methods on the continuum between disease and health	Examining copy number alterations, unexpected relationships and population structure using SNPs

Using computational protein docking to model the structure and specificity of protein interactions	Computational antibody structure prediction and antibody-antigen docking

Three statistical applications in genomics: Redefining CpG islands, peak detection from multiple ChIP-chips, and data normalization for second generation sequencing	Interpretable set analysis for high-dimensional data

Genomic and transcriptomic characterization of breast, colorectal, pancreatic, and brain cancers as well as anti-tumor agent, C. novyi-NT	Bipolar disorder genetics: Using bioinformatics to guide an investigation of Epistasis

Investigating heterogeneities in the canine transmural ventricular proteome: Application of reverse phase protein microarrays	Network analysis of disease

Investigations of polyproline II propensity in engineered polypeptides and the proteome	Computational approaches to study the relation between genomic variations and phenotypes

Study of retrotransposons using high throughput technologies