ProQuest Subject Index - Bioinformatics at PRINCETON UNIVERSITY

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You are viewing titles for PRINCETON UNIVERSITY in the Bioinformatics available through the UMI Dissertations & Thesis Gradwoorks site

Multiple layers of gene expression regulation during murine embryonic stem cell differentiation induced by Nanog down regulation	Natural selection in molecular evolution: Genome-scale, parsimony-based approach

A systematic approach for mapping bimolecular interactions in regulatory networks	Information flow in biological networks

Experimental and computational studies of the in vivo genomic repertoire of DNA-protein interactions in Escherichia coli	Topology and function in protein interaction networks

Analysis and visualization of large-scale gene expression microarray compendia	Context-sensitive methods for learning from genomic data

Negative feedback control of EGFR by Argos	Mathematical optimization and algorithmic development for protein structure prediction

Systematic genetic analysis of bacterial behaviors	Emergence of predictive capacity within microbial genetic networks

Using structural information in machine learning applications	Transcription factor-DNA interaction and bacterial quorum sensing gene correlation

Computational de novo protein design with flexible templates	Analysis of large genomic data collections

Novel optimization-based methods of studying cellular signaling pathways	Validation tests and genewise variance estimation for microarray data

Algorithms for the identification of functional sites in proteins	Synthetic biology: Progressing from protein design toward de novo genomes

High-dimensional statistical learning and nonparametric modeling	Prediction algorithms and evolutionary interpretation of functional genomic data

Experimental and Computational Approaches for Genetic Dissection of Complex Phenotypes	Devising effective similarity measures and learning algorithms for the study of metazoan gene expression

Efficient algorithms for liquid chromatography coupled mass spectrometry based protein quantification	Network-based analysis of protein function

The information-dense genomes of Oxytricha trifallax	High-throughput methods for in silico discovery of peptides, proteins, and post-translational modifications in proteomics

Inferring metabolic regulation from high-throughput data