Mobilization of nucleosomes in short arrays
by Sabri, Abdellah, M.S., SOUTHERN ILLINOIS UNIVERSITY AT CARBONDALE, 2006, 96 pages; 1440160

Abstract:

DNA is compacted into chromatin in eukaryotic cells. The histone-modifying enzymes and the enzymatic activity of the ATP-dependent chromatin-remodeling proteins are often involved in the disruption of the chromatin structure to allow access for the molecular machines that use it as a substrate for transcription, replication, recombination and repair.

DNA-protein site directed mapping showed that various chromatin remodeling complexes slide nucleosomes within di and tri-nucleosome arrays differently. ISW2 can translocate (slide) nucleosomes within an array up to 30 bp from the adjacent nucleosome. ISW2 slides nucleosomes towards the DNA ends in contrast to INO80 that slides the nucleosomes away from the DNA ends and introduces 30 bp spacing between nucleosomes. SWI/SNF slides nucleosomes apart within a di-nucleosome array. In addition to the sliding, SWI/SNF demonstrates capacity to evict an H2A-H2B dimer as an intermediate step, followed by eviction of one nucleosome.

 
AdviserBlaine Bartholomew
SchoolSOUTHERN ILLINOIS UNIVERSITY AT CARBONDALE
SourceMAI/ 45-02, p. , Mar 2007
Source TypeThesis
SubjectsMolecular biology
Publication Number1440160
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